Training materials
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End-to-End Tissue Microarray Image Analysis with Galaxy-ME
Image segmentation Tissue imaging analyses -
Introduction to Image Analysis using Galaxy
Image segmentation Conversion Object counting Overlay introduction -
Training Custom YOLO Models for Segmentation of Bioimages
Image segmentation Image annotation Deep learning advanced -
Tracking of mitochondria and capturing mitoflashes
Isolated object tracking Temporal analysis Time-lapse data analyses -
Nucleoli segmentation and feature extraction using CellProfiler
Image segmentation Object feature extraction Multi-channel image analyses -
Voronoi segmentation
Tessellation Image segmentation Object counting Overlay Multi-channel image analyses -
Quantification of electrophoresis gel bands using QuPath and Galaxy imaging tools
ROI selection Conversion Object feature extraction Multi-channel image analyses -
Object tracking using CellProfiler
Isolated object tracking Multi-channel image analyses -
Parameter tuning and optimization - Evaluating nuclei segmentation with Galaxy
Parameter optimisation Validation advanced -
Quantification of single-molecule RNA fluorescence in situ hybridization (smFISH) in yeast cell lines
IDR dataset Spot detection Rasterisation Overlay analyses